Scripts used in Tennant, et al., 2020 - Fluorescent in vivo editing reporter (FIVER): A novel multispectral reporter of in vivo genome editing
- Classify_Ratio_Nucleus_Band_MEFs.groovy (QuPath)
- Classify_Ratio_Nucleus_Band_MTECs.groovy (QuPath)
- Combine_Project_Results.groovy (QuPath)
- A Nikon JOBS workflow was also used in this paper - it can be found here: Points on a Plate PFS Surface.bin
Please Note: Subsequent development of QuPath means these scripts may no longer be needed as some of the functionality they added is now accessible in the GUI. For more information visit QuPath's website