1 | SoftwareID | SoftwareName | SoftwarePublisher | SoftwareURL | SoftwareLicenseFamily | SoftwareMeta | Status | Notes |
---|---|---|---|---|---|---|---|---|
2 | 1 | 7zip | Igor Pavlov | https://www.7-zip.org/ | FLOSS | Utility | Active | File archiver |
3 | 10 | Anaconda | Anaconda, Inc | FLOSS | Programming | Active | Package manager for Python | |
4 | 78 | ArcGIS Desktop | ESRI | Proprietary | GIS | Deprecated | Desktop GIS | |
5 | 11 | ArcGIS Pro | ESRI | Proprietary | GIS | Active | GIS | |
6 | 12 | Arduino IDE | Arduino | FLOSS | Programming | Active | IDE for Arduino | |
7 | 9 | Audacity | The Audacity Team | FLOSS | Audio | Active | Digital audio editor | |
8 | 13 | Avidemux | The Avidemux Team | FLOSS | Video | Active | Video processing/editor | |
9 | 14 | Avogadro | Avogadro Development Team | http://avogadro.cc/ | FLOSS | Science | Active | molecule editor and visualizer |
10 | 47 | BKChem | Beda Kosata; Reinis Danne | FLOSS | Science | Active | chemical drawing program | |
11 | 15 | Blender | Blender Foundation | FLOSS | Video | Active | Digital creation suite: 3D/2D, video | |
12 | 16 | Celestia | The Celestia Team | https://celestia.space/ | FLOSS | Science | Active | 3D space visualizer/simulation |
13 | 17 | ChemStation | Agilent | Proprietary | Science | Active | GC-MSD analytical software. Provided within the SI-Legacy virtual machine. | |
14 | 18 | Chromas | Technelysium Pty Ltd | Freeware | Science | Active | DNA trace viewer for sequencing | |
15 | 56 | Cn3D | National Institutes of Health | FLOSS | Science | Active | macromolecular structure viewer | |
16 | 65 | CURL | Curl | https://curl.haxx.se/ | FLOSS | Programming | Active | command line tool for data transfer |
17 | 48 | DNA Master | Jeffrey Lawrence | Freeware | Science | Disabled | DNA sequence editor and analysis package | |
18 | 81 | Drone2Map | ESRI | Proprietary | GIS | Active | ArcGIS Drone2Map is the desktop app for your geographic information system (GIS) drone mapping needs. | |
19 | 20 | ELAN | PerkinElmer | Proprietary | Science | Active | IC-PMS analytical software. Provided within the SI-Legacy virtual machine. | |
20 | 19 | Elements | Florian Fechner | FLOSS | Science | Active | Digital perdiodic table | |
21 | 21 | FFmpeg | FFmpeg team | https://ffmpeg.org/ | FLOSS | Multimedia | Active | is the leading multimedia framework, able to decode, encode, transcode, mux, demux, stream, filter and play pretty much anything that humans and machines have created. |
22 | 80 | Fiji-ImageJ | Fiji Team | https://fiji.sc/ | FLOSS | Science | Active | Fiji ImageJ comes with bundled plugins for scientific image analysis |
23 | 22 | FileZilla | Tim Kosse | FLOSS | Network | Active | FTP/sFTP client | |
24 | 3 | Firefox | Mozilla Foundation | FLOSS | Browser | Active | Web browser | |
25 | 49 | FVS (Forest Vegetation Simulator) | USDA/USFS | FLOSS | Science | Disabled | is a forest growth simulation model. It simulates forest vegetation change in response to natural succession, disturbances, and management. | |
26 | 50 | GeoGebra Geometry | GeoGebra | FLOSS | Science | Active | Geometry math | |
27 | 51 | GeoGebra Graphing Calculator | GeoGebra | FLOSS | Science | Active | Geometry graphing calculater | |
28 | 52 | Ghostscript | Artifex | FLOSS | Reader | Active | An interpreter for the PostScript language and for PDF | |
29 | 24 | Ghostwriter | Wereturtle | FLOSS | Editor | Active | Markdown editor | |
30 | 25 | GIMP | The GIMP Development Team | https://www.gimp.org/ | FLOSS | Editor | Active | Raster graphics/image editor |
31 | 4 | Google Chrome | Proprietary | Browser | Active | Web browser | ||
32 | 27 | Google Earth Pro | Proprietary | GIS | Active | 3D representation of the Earth with satellite imagery | ||
33 | 53 | GPSBabel | Robert Lipe | FLOSS | GIS | Active | GPS transfer tool. Unit convertor. | |
34 | 54 | GSIM | Vadim Zorin | Freeware | Science | Active | tool for visualisation and processing of experimental and simulated nuclear magnetic resonance (NMR) spectra | |
35 | 28 | ImageJ | National Institutes of Health | https://imagej.nih.gov/ij/ | FLOSS | Science | Active | is a Java-based image processing program |
36 | 29 | Inkscape | The Inkscape Development Team | https://inkscape.org/ | FLOSS | Editor | Active | Vector graphics editor |
37 | 30 | Irfanview | Irfan Å kiljan | Freeware | Editor | Active | Image/graphics editor and viewer | |
38 | 31 | JAVA RE | Oracle | Proprietary | Programming | Disabled | JAVA Runtime environment | |
39 | 66 | Jmol | Jmol | FLOSS | Science | Active | is a molecular viewer for 3D chemical structures | |
40 | 32 | JMP Pro | SaS | Proprietary | Science | Active | Statistical analysis | |
41 | 71 | Kdenlive | KDE | https://kdenlive.org | FLOSS | Video | Active | Video editing; GUI to FFmpeg |
42 | 67 | KiTTY/PuTTY | KiTTY Team | FLOSS | Utility | Active | SSH Client | |
43 | 33 | Krita | KDE | https://krita.org/en/ | FLOSS | Editor | Active | graphics editor designed for digital painting and animation. |
44 | 68 | Lame | Lame Project | FLOSS | Audio | Active | is a high quality MPEG Audio Layer III (MP3) encoder | |
45 | 34 | LoggerPro | Vernier | Proprietary | Science | Active | Data collection and analysis software | |
46 | 35 | LyX | The LyX Team | https://www.lyx.org/ | FLOSS | Editor | Active | LaTeX editor |
47 | 64 | Mathematica | Wolfram | Proprietary | Science | Active | neural networks, machine learning, image processing, geometry, data science, visualizations | |
48 | 79 | MatLab | MathWorks | Proprietary | Science | Deprecated | No longer supported. Replaced by Mathematica | |
49 | 55 | MEGA | MEGA Software Development Team | Proprietary | Science | Active | Molecular Evolutionary Genetics Analysis | |
50 | 36 | MiKTeX | Christian Schenk | https://miktex.org/ | FLOSS | Editor | Active | TeX/LaTeX typesetting |
51 | 37 | Mp3tag | Florian Heidenreich | Freeware | Editor | Active | Mp3 metadata editor | |
52 | 38 | Mushroom MatchMaker | Ian Gibson | Freeware | Science | Active | program to help identify mushrooms of the Pacific Northwest | |
53 | 58 | NodeJS | NodeJS Community | https://nodejs.org | FLOSS | Programming | Active | an asynchronous event-driven JavaScript runtime |
54 | 2 | Notepad++ | Don Ho | FLOSS | Text editor | Active | text editor | |
55 | 39 | Office 2022 | Microsoft | https://www.office.com/ | Proprietary | Office | Active | Office productivity suite |
56 | 40 | OneDrive | Microsoft | Proprietary | Office | Disabled | File hosting service and synchronization service | |
57 | 57 | OpenChrom | LABKicate | FLOSS | Science | Active | chromatography, spectrometry and spectroscopy; replaces ChemStation | |
58 | 72 | OpenShot | OpenShot Studios, LLC | FLOSS | Video | Active | Video editing. | |
59 | 74 | PC-ORD | Wild Blueberry Media LLC | Proprietary | Science | Active | performs multivariate analysis of ecological data entered in spreadsheets. | |
60 | 77 | PHREEQC | USGS | Public Domain | Science | Active | designed to perform a wide variety of aqueous geochemical calculations | |
61 | 41 | PowerBI | Microsoft | Proprietary | Office | Active | analytics service | |
62 | 60 | Praat | Paul Boersma and David Weenink | FLOSS | Science | Active | Doing phonetics by computer | |
63 | 42 | Python | Python Software Foundation | https://www.python.org/ | FLOSS | Programming | Active | interpreted, high-level, general-purpose programming language. |
64 | 43 | QGIS | QGIS Development Team | FLOSS | GIS | Active | GIS | |
65 | 7 | R (Project for Statistical Computing) | R Core Team | FLOSS | Data Science | Active | programming language for statistical computing | |
66 | 83 | Raven Pro | The Cornell Lab of Ornithology | Proprietary | Audio | Active | software program for the acquisition, visualization, measurement, and analysis of sounds | |
67 | 61 | Resampling Stats for Excel | statistics.com | Proprietary | Science | Active | resampling methods in Excel | |
68 | 8 | RStudio | RStudio, Inc. | FLOSS | Data Science | Active | integrated development environment (IDE) for R, a programming language for statistical computing | |
69 | 76 | SageMath | Sage | FLOSS | Science | Active | mathematics software system | |
70 | 44 | Scribus | The Scribus Team | https://www.scribus.net/ | FLOSS | Editor | Active | Professional desktop publishing |
71 | 73 | Shotcut | Meltytech, LLC | https://shotcut.org/ | FLOSS | Video | Active | Video editing. |
72 | 45 | Stellarium | The Stellarium Development Team | https://stellarium.org/ | FLOSS | Science | Active | Planetarium, a three-dimensional map of the stars, typically centered on Earth |
73 | 5 | Sumatra PDF | Krzysztof Kowalczyk | FLOSS | Reader | Active | document viewer that supports many document formats, Portable Document Format (PDF). | |
74 | 59 | The NERSNT/GOLDMAN equation simulator | University of Arizona | Freeware | Science | Deprecated | transmembrane electrical potential difference. Requires Adobe Flash Player | |
75 | 62 | Visual Studio Code | Microsoft | FLOSS | Editor | Active | Code editing | |
76 | 6 | VLC | VideoLAN | FLOSS | Multimedia | Active | Media player | |
77 | 63 | VMWare Player | VMWARE | Proprietary | Virtualization | Active | Virtual Machine player. | |
78 | 69 | wget | GNU | FLOSS | Utility | Active | web file retriever for HTTP/HTTPS/FTP/FTPS | |
79 | 70 | Youtube-dl | Youtube-dl team | FLOSS | Utility | Deprecated | command-line program to download videos from YouTube, and some other video sites | |
80 | 82 | yt-dlp | yt-dlp | FLOSS | Video | Active | command-line program to download videos from YouTube, and some other video sites | |
81 | 46 | Zotero | Roy Rosenzweig Center for History and New Media | https://www.zotero.org/ | FLOSS | Editor | Active | reference management software to manage bibliographic data and related research materials |
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